SE2010686

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5888
  • Medicago truncatula
  • SE2010686
  • Tc1/Mariner
  • St18
  • MtChr5:14860577-14860851
  • TA
  • TACTCCCTCCGTTTCAAAATGAGTGTCGCTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
                       T          ----------------  TTTGGCACACAGATTAAGAAATGGAATGAAATAATCATTGGATATAACACTTTTACCAAACTGCCCTTACTTTATAAGAAAAAGACAAAATTA
TACTCCCTCCGTTTCAAAATGAG GTCGCTTTAG                GC                                                                                             
||||||||||||||||||||||| ||||||||||                ||                                                                                             A
ATGAGGGAGGCAAAGTTTTACTC CAGTGAAATC                GT                                                                                             
                       T          GATTTTTTTAAACAAA  TTTACTTACAGTGAAATGTAAAGGTTATGTTGAAATTAAAAAAGGAAGGTTGAAATGGGAGAGGTTGAAAAAGAGTGTTAAAAGTTACGTTGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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