SE2020697

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5899
  • Medicago truncatula
  • SE2020697
  • Mutator
  • M139
  • MtChr8:35452194-35452387
  • AAAATTATG
  • TGGATTTAGATCCTCTCCAACC

Secondary structure and sequence

TSD    TIR
5'



3' 
 AAAATTA    T  A          A   -----ATTTCTC      -  TTTGTTCTGTCATAATCTAAGATTCATTCACATTTTCTCTCTTTTTCCC
        TGGA TT GATCCTCTCC ACC            TTATGT AG                                                 
        |||| || |||||||||| |||            |||||| ||                                                 T
        ACCT AA CTAGGAGAGG TGG            GGGAGA GA                                                 
TATTAAAA    T  C          A   AAAAAACACGTT      T  AAAGACTAAGTTACCAACTAACTGAGTATTTACTTGTTTTTTGTTGTGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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