SE2020717

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5919
  • Medicago truncatula
  • SE2020717
  • Mutator
  • M2
  • MtChr8:17778032-17778221
  • CTTATTTAA
  • TATTTAAGAGAAATGATATTTGAACATCCATTTTGTGACAAC

Secondary structure and sequence

TSD    TIR
5'



3'
CT  TT    -  AAA  A          T      -------------         TTTCTCTCTCATACTCACATTATTTTTTACTTTATCTCTCTA   -- TT  ATTTTCGTGCAAATA
  TA  TAAG AG   TG TATTTGAACA CCATTT             TGTGACAAC                                          TTG  C  TG               
  ||  |||| ||   || |||||||||| ||||||             |||||||||                                          |||  |  ||               C
  AT  ATTC TC   AC ATAAACTTGT GGTAAA             ACACTGTTG                                          GTA  A  AA               
 A  TT    C  CTC  A          T      CCAACTATTGAAT         ------------------------------------------   TT --  TGTTTCTTTTTTACT

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End