SE2030723

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5925
  • Medicago truncatula
  • SE2030723
  • hAT
  • Hat9
  • MtChr6:4063624-4063820
  • GTTGATAT
  • ATCTATGAAGCACGGATACGGACACGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
GTTGAT                   GGA A    -----CAA  GACACGACACGGACACTGACACGCCGACACAACTAATAATTTGAAAAAATCACAAAA
      ATCTATGAAGCACGGATAC   C CGGA        CG                                                         
      |||||||||||||||||||   | ||||        ||                                                         T
      TGGATACTTCGTGCCTGTG   G GCCT        CA                                                         
TATAGT                   -AG A    AATCCACA  GAGCCACAGCCTGTGCACAGCACAGCACAGGCTGTGGTTGTGAACATTAATGTGACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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