SE2020738

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5940
  • Medicago truncatula
  • SE2020738
  • Mutator
  • M2
  • MtChr1:4372929-4373131
  • TTTTTCCAA
  • AAGAGCAATGTTATTTGAACAACCCTTTATTGTGACAACTTCTTATAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTTCC     C    T             ------------    AT          -----        AACCAA    ---- A AAAAAGATTTAGATAGTGACACAAAAA
       AAGAG AATG TATTTGAACAACC            CTTT  TGTGACAACT     TCTTATAC      ATTA    T T                           
       ||||| |||| |||||||||||||            ||||  ||||||||||     ||||||||      ||||    | |                            
       TTCTC TTAC ATAAACTTGTTGG            GAAA  ACACTGTTGA     AGAGTATG      GTGT    A G                           
AACCTTT     T    T             TAAAAAACTATT    --          AAGAG        -----A    AACA - AAGATGGAAGAGAGAGATAATGAAACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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