SE2020752

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5954
  • Medicago truncatula
  • SE2020752
  • Mutator
  • M145
  • AC233070:44002-44231
  • GTCAAACAC
  • ACGGATGAGGATTTTCTGCTGTAAAATATTACAC

Secondary structure and sequence

TSD    TIR
5'



3' 
GTCAAAC      GA      T   C    --    A              ACACTGTAGCTGTTCTGCACCGCCTGATCTGAACTGAACAGCTCAGATCTGACATTGTGTGAAAT
       ACGGAT  GGATTT CTG TGTA  AAAT TTACACGCAGTTGC                                                                 
       ||||||  |||||| ||| ||||  |||| ||||||||||||||                                                                 T
       TGCCTA  CCTAAA GAC ACAT  TTTA AATGTGTCAAACGG                                                                 
CACAAAC      GA      T   A    CG    -              CGTCATCGTTTAGAGTCGCTAGTTAGGTACTAGACTACCAAGGTTAAGTGTCGTGCCTAAAGTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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