SE2010754

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5956
  • Medicago truncatula
  • SE2010754
  • Tc1/Mariner
  • St16
  • MtChr5:10206801-10207078
  • TA
  • TACTCCCTCCGTTTCAAAATGAGTGTCGTTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
                                  G   TTACACACATATTAAGAAATGCAATGATTAAAAGAAAGAGAATGGTTATTTTACCAAATTATCCTTATTAGCTATTGGTTAGTTTTAAAAGTAATACTTTG
TACTCCCTCCGTTTCAAAATGAGTGTCGTTTTAG TCT                                                                                                     
|||||||||||||||||||||||||||||||||| |||                                                                                                      
ATGAGGGAGGCAAAGTTTTACTCACAGCGAAATC GTT                                                                                                     
                                  G   TTTTTTTAACAAAGTTTTACTTACAGTGAAAGTCAAAGGTTACGTTATTATTGAAAAAGAAAAGTTAACATGGGAGGTTAATTATGAGACGTGTGATGAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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