SE2030756

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5958
  • Medicago truncatula
  • SE2030756
  • hAT
  • Hat10
  • MtChr7:17472163-17472415
  • ATCTCATG
  • CTCATG

Secondary structure and sequence

TSD    TIR
5'



3' 
 AT      ------    AAATGACGGTATCATATTATGACTTGAGTAAACTCAAATCAGTCATAATCTATGAAGCACGGACACTCCTCGAGTTAGGCGTGACACGACACCGACACTTGTAATTACACT
   CTCATG      ATCG                                                                                                               
   ||||||      ||||                                                                                                                
   GAGTAC      AGTG                                                                                                               
GAT      AAAGAA    AAAAAATGAACAAGCATTTAATACTGGATACTTCGTGCCTATGCCTGTGGCCTGTGCTGTGCCTGTGACTGTGCGGCTGTGGTGATTATTAAACTCTTTTAATGTATTAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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