SE2030763

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5965
  • Medicago truncatula
  • SE2030763
  • hAT
  • Hat2
  • MtChr7:3773742-3773938
  • TTAGGAAC
  • CTATGAAGCACGGACACTCCTCGGATTAGGCGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAGGAAC              ------   --T C      TA      TCCCG     -       TGTCGTGTCCGACACGACACCGACACTTGTAATTGCA
        CTATGAAGCACGGA      CAC   C TCGGAT  GGCGTG     GTGTC GGACACG                                     
        ||||||||||||||      |||   | ||||||  ||||||     ||||| |||||||                                     C
        GATACTTCGTGCCT      GTG   G GGCCTA  CTGTAC     CTGTG CTGTGCG                                     
CAAGGATT              ATGTCT   TCT T      TG      -----     A       ACTATGTCGATTATTAAACTTTTTTAGTGTATTAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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