SE2020780

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5982
  • Medicago truncatula
  • SE2020780
  • Mutator
  • M2
  • MtChr8:23253740-23254047
  • GACAGCTCA
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
     GCTCACA  AGAAACTAATAATCTTTCATTCATGTCTGCATAATTTACATAAATTACAGAGAAATGATATTTGAACATCCATTTAGTGATAACTTTTGCAACAACTTTCTCTCTCATACTCACATTACTTTTTACTTTATCTCTCTATTGCTA
 GACA       AG                                                                                                                                                
 ||||       ||                                                                                                                                                 
 AATG       GT                                                                                                                                                
A    -------  TTATTCAGTTGCTATTAAACGTAAGTAATCAAAGGGTTATAGTGTAACATTAAATCTCCTCACAATAAACTTGTTGGTTAAACCACTGTTGAATAAACTGTTGGTATAAAATGTTTCTTTTTTCACCATAACCGTGCCTTTGGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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