SE2020790

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5992
  • Medicago truncatula
  • SE2020790
  • Mutator
  • M149
  • MtChr6:336294-336689
  • TAATTTTTA
  • TTAGGCTTAATTGCACTTTTGGTCCTCGCATTTTTAGCAGCTTACGAAAATGGTCCTGCCTCTTTCAAATCGAACAAAATTGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATTT                                                       C                           ----      -  CCCCTATTTTCACCGCTAAAAACGCACAGTTCACCATCTGCAACAAGCTTTAACAGTTCACCAGCACCTAAAATTCTCATTTCAGCGTGGACTTAAGC
      TTAGGCTTAATTGCACTTTTGGTCCTCGCATTTTTAGCAGCTTACGAAAATGGTC TGCCTCTTTCAAATCGAACAAAATTGT    AGTCCT AC                                                                                                  
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    |||||| ||                                                                                                  C
      AATCCGAATTAACGTGAAAACCAGGAGTGTAAAAATCGTCGAGTGCTTTTACCAG ACGGAGAAAGTTTAGCTTGTTTTGACA    TTTGAT GT                                                                                                  
ATTTTT                                                       A                           GGGA      A  AAAAAAACGTCGAAATCAGGATGGGGGATAAAAGTGGAGGTTTTTGCGTGTTAAGTGGTAGACGTTGTTCGAGGTTGTCAAGTGGTAGTAACAAATCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3