SE2020813

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6015
  • Medicago truncatula
  • SE2020813
  • Mutator
  • M14
  • MtChr7:31205370-31205702
  • TAAAATATA
  • TAGGCAAAATTACACTTTTAGTCCCTTAACTTAATTTCAGGTAACAGTTTGGTCCTTTATCTTTTTTTCATTTCAATTTGGTCCTTTTTGTCCATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAATA                                                                                                  ------CAT      -   TAAGTTTAAAATTCATGATTTTATTTTCTTATGGTCTTTCAATCTT
       TAGGCAAAATTACACTTTTAGTCCCTTAACTTAATTTCAGGTAACAGTTTGGTCCTTTATCTTTTTTTCATTTCAATTTGGTCCTTTTTGTCCATTTT         ATGAAT TTT                                              
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||                                               
       ATCCGTTTTAATGTGAAAATCAGGGAATTGAATTAAAGTCCATTGTTAAACCAGGAAATAGAAAAAAAGTAAAGTTAAACCAGGAAAAACAGGTAAAA         AAAGTT GAA                                              
ATATAAA                                                                                                  ATATATGTA      C   GTTTAGATTATAAGAATACGTTTGTATCTGCTCCTAGTATCTAAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3