Plant MITE

SE2010815

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_6017
Medicago truncatula
SE2010815
Tc1/Mariner
St4
MtChr2:29869453-29869603
TA
TACACCCTTTGATCATTATTATAAGTCAAAATTAACATTTTAAATTCATTCAATACATGATGTATGTGGTCTATATTATAGACCATGTACATCATTTATTCAATGAATATAAAAGATGTATTTTTGCTTATAATAGTGATCGGAGGGTGTA

Secondary structure and sequence

TSD TIR

5'

3'

                          C     TA CA     A       C    C                  A
TACACCCTTTGATCATTATTATAAGT AAAAT  A  TTTTA ATTCATT AATA ATGATGTATGTGGTCTAT 
|||||||||||||||||||||||||| |||||  |  ||||| ||||||| |||| |||||||||||||||||| T
ATGTGGGAGGCTAGTGATAATATTCG TTTTA  T  AAAAT TAAGTAA TTAT TACTACATGTACCAGATA 
                          T     TG AG     A       C    T                  T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2010815

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2010815