SE2010817

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6019
  • Medicago truncatula
  • SE2010817
  • Tc1/Mariner
  • St11
  • MtChr5:39390638-39390899
  • TA
  • TACTCCCTCCGTCCCTTAATAAATGACCCAGTTGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
                T     A   C C       -    TACATTATTGACTTGACATACTTTGACCATACTTTTCTACTAATTCACAAAGATAAATAATATCATATAAGATGTTGTTGGATTCGTCTC
TACTCCCTCCGTCCCT AATAA TGA C AGTTGAC AATA                                                                                          
|||||||||||||||| ||||| ||| | ||||||| ||||                                                                                          G
ATGAGGGAGGCAGGGA TTATT ACT G TCAACTG GACT                                                                                          
                T     C   A A       A    GTATGTATGGTTACGTATACAAAATAGAAACTATAGAAGTTAAGAGATGATTTTTTTTAATATTTTTAAATTATAAAATTTTTATGAGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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