SE2020841

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6043
  • Medicago truncatula
  • SE2020841
  • Mutator
  • M18
  • MtChr7:17415487-17415693
  • TATAAAAAA
  • AGAGGAATGCTAGCAACACTCACTTTTGAGCACTCTCTCTAACACTCACCCTCTCATTGGATAAAATCAATGTATGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATAAAAA                     A                           C    C     ATA      A   AT   CCAC       TGTGGGT
        AGAGGAATGCTAGCAACACTC CTTTTGAGCACTCTCTCTAACACTCAC CTCT ATTGG   AAATCA TGT  GTC    CACTTTG       
        ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||   |||||| |||  |||    |||||||       T
        TCTCCTTACGATCGTTGTGAG GAAAACTCGTGAGAGAGATTGTGAGTG GAGA TAACC   TTTAGT ACA  CAG    GTGAAAT       
AAAAAATA                     A                           A    A     AAA      A   CC   --AT       TTTTAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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