SE2010847

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6049
  • Medicago truncatula
  • SE2010847
  • Tc1/Mariner
  • St18
  • MtChr2:29171929-29172215
  • TA
  • TACTCCCTCCGTTTCAAAATGAGTGTCATTTTAGCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
                           A         ----      --------------  T   T  AAAT     ------ CGCTTTACATTTTCAATGCAACTTTAATTTTTTTCTTCCAACTTTACCCTCAATAAATACTCAAACTTTTCT
TACTCCCTCCGTTTCAAAATGAGTGTC TTTTAGCCA    AAAAAA              TT GTT CA    GAATG      T                                                                        
||||||||||||||||||||||||||| |||||||||    ||||||              || ||| ||    |||||      |                                                                        C
ATGAGGGAGGCAAAGTTTTACTCACAG GAAATCGGT    GTGTGT              TA TTT CA    TCAGT      T                                                                        
                           C         TAAC      CTAATTCTTTAACT  -   -  ----     TTACAG ATTGTTAAAATGATTTTATTGGAATGAAATATTCTTTTTATGTTTGAATTTCAACATAACTTTTAATACACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3