SE2020856

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6058
  • Medicago truncatula
  • SE2020856
  • Mutator
  • M153
  • MtChr5:36413450-36413649
  • CAAAATATA
  • GGA

Secondary structure and sequence

TSD    TIR
5'



3' 
CAAAATATA   TAA   TT   G    --   TT   TCCATACACACATTGTACCACTCGATGTGAGAGTGTATGAGAGACAATACATGTGAGTTTTTTTGT
         GGA   TGT  CAT TACA  CAC  TTT                                                                  
         |||   |||  ||| ||||  |||  |||                                                                  G
         CCT   TCA  CTA TGTA  TGG  TGG                                                                  
 ATATAAAA   -CA   --   -    TC   --   AATCCACCGTACATGGTGAACATGTGGGTGTGTGTTAAAACTGTTCACAGGAACACCAGGGGGTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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