SE2020861

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6063
  • Medicago truncatula
  • SE2020861
  • Mutator
  • M154
  • MtChr2:6387078-6387293
  • ATGAGATGG
  • ATGAGATGGTGAGAAACTCTTTTATAAACATAATTACAAATGATAAATATTTAGACACACTTACATCAAATGCAAAAATTAAAAGAGAATAAAACTAAATGATGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
  G GA G                 AA         C                  C   C            C      --    A        AAC     G     GA
AT A  T GTGAGAAACTCTTTTAT  ACATAATTA AAATGATAAATATTTAGA ACA TTACATCAAATG AAAAAT  TAAA GAGAATAA   TAAAT ATGTT  
|| |  | |||||||||||||||||  ||||||||| |||||||||||||||||| ||| |||||||||||| ||||||  |||| ||||||||   ||||| |||||   
TG T  A TACTCTTTGAGAAGATA  TGTGTTGAT TTTACTATTTATAAATCT TGT AGTGTAGTTTAC TTTTTA  ATTT TTTTTATT   ATTTA TGTAG  
  G AG G                 CC         A                  T   A            C      AA    G        --A     G     TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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