SE2020863

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6065
  • Medicago truncatula
  • SE2020863
  • Mutator
  • M8
  • MtChr1:32637790-32638092
  • TATAATCAA
  • AGGGTTAATTAAGTTTTTAGTCCCTATAAATATTCAGAATTTTGTTTTTAGTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATAATCA                                    G A               CCAC                           ATAAA       ATCAATAT     GTCCTTATAAAATTTTTCATAAGCATTTTTAGTCCCT
        AGGGTTAATTAAGTTTTTAGTCCCTATAAATATTCA A TTTTGTTTTTAGTCC    AAAATAAAATCACACTTTTTAGTCCTT     ATTTTCC        TTTTA                                     
        |||||||||||||||||||||||||||||||||||| | |||||||||||||||    |||||||||||||||||||||||||||     |||||||        |||||                                      
        TCCCAATTAATTCAAAAATCAGGGATATTTATAAGT T AAAACAAAAATCAGG    TTTTATTTTAGTGTGAAAAATCAGGGA     TAAAAGG        ATTCG                                     
AACTAATA                                    G C               AATA                           CACTG       -------A     TAAAATCCCTGATTTTTACGACTACCTTTTTAAAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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