SE2030867

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6069
  • Medicago truncatula
  • SE2030867
  • hAT
  • Hat44
  • MtChr7:13681090-13681383
  • CGTGTCCC
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
CGTG       -  GTGGCCCTGAGGGAGGGCGCGAGGGGCTGCAGCCCAGGGCACCATTTCTTTAGGGGCATAAAAATTATTATTTTTACTTCATAGTCACTACAAAATAGATATATTTCTTTTTAACTTGTTTTGATTAATGCTATT
    TCCCCAG GG                                                                                                                                       
    ||||||| ||                                                                                                                                        
    TCTGTGC TC                                                                                                                                       
   C       G  CCGGCCAGGATTCTAAAAACCACGGACTCCGCTTTCTTTTTTTAACATGGGAAAATTAATAAGATTATAAAAAGCAGAAAATAAAAAACAACGTGTTCTAAGTAAATATTAGTTTCAAGAGATTTTTCATAAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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