SE2020900

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6102
  • Medicago truncatula
  • SE2020900
  • Mutator
  • M156
  • MtChr1:20263946-20264146
  • CTATTTTAG
  • CTATTTTAGGAGAAATTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
   TTT      A      ATCT  AA                          A A    TT        -       GTA        TAG     AATGA
CTA   TAGGAG AATTCT    TG  CACAAACTCAAATCAAATTTATTTGG C CACA  CACAAATG AAAAAAT   AAAGAGAA   ATTTA     
|||   |||||| ||||||    ||  |||||||||||||||||||||||||| | ||||  |||||||| |||||||   ||||||||   |||||     T
GAT   ATCCTC TTAAGA    AC  GTGTTTGGGTTTAGTTTAAATAAACC G GTGT  GTGTTTAC TTTTTTA   TTTCTCTT   TAAAT     
   TTT      G      ATCT  CC                          C C    --        A       -AA        TCA     CAGTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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