SE2020903

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6105
  • Medicago truncatula
  • SE2020903
  • Mutator
  • M116
  • MtChr1:5140937-5141130
  • TTACTAAAA
  • AAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTACTAA    AGAA              C  AC      G      C  -      -    T      TTATTAAAAAG   TGTA    TTA    GTAA
       AAGG    TGTTAACCAGTGCC CC  GGCATT GTTAAG AG CTAAAA TAGG AAAATT           TGG    ATAA   GTTA    
       ||||    |||||||||||||| ||  |||||| |||||| || |||||| |||| ||||||           |||    ||||   ||||     
       TTCC    ACAATTGGTTACGG GG  CTGTGA CAATTC TT GGTTTT ATCT TTTTAA           ACC    TATT   CAAT    
AAAATCA    CAGA              A  CC      G      C  A      C    -      -------CAGA   TTTG    TGA    GAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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