SE2020935

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6137
  • Medicago truncatula
  • SE2020935
  • Mutator
  • M147
  • MtChr6:3151118-3151320
  • CACAAACTT
  • GAATAATGATGTTCCCACATTGAAAGGATTCTAAGAAAAACCACGAAAATATCAAAATAACTTCATCGGGAGTTAACTGTCG

Secondary structure and sequence

TSD    TIR
5'



3'
CACAAACTT   TAA  A    CC   -   G -    ATT        A    CGA     T    -A    -------        G      ---C     ATGAAT
         GAA   TG TGTT  CAC ATT A AAGG   CTAAGAAA ACCA   AAATA CAAA  TAAC       TTCATCGG AGTTAA    TGTCG      
         |||   || ||||  ||| ||| | ||||   |||||||| ||||   ||||| ||||  ||||       |||||||| ||||||    |||||       
         CTT   AC ACAA  GTG TAA T TTCC   GATTCTTT TGGT   TTTAT GTTT  ATTG       AAGTAGCC TCAATT    ATAGC      
TTCAAACAC   TTA  A    AT   A   G C    ---        G    -AA     T    AA    CAGTTAA        A      AATA     CAATTT

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End