SE2020941

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6143
  • Medicago truncatula
  • SE2020941
  • Mutator
  • M33
  • MtChr3:26960761-26960964
  • ATATTTTAA
  • GGGTCATGTTAACTTGTGCCCTTAGGGCACATGTTAAG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATATTTTAA   TC                 T               CATTAATTTC             T   A    -AAT    AATATCAATATTAAACATTT
         GGG  ATGTTAACTTGTGCCCT AGGGCACATGTTAAG          ATTCCATTAATGG AAT ATTT    GAAA                    
         |||  ||||||||||||||||| |||||||||||||||          ||||||||||||| ||| ||||    ||||                     
         CCC  TACAATTGAACACGGGA TCCCGTGTACAATTC          TAAGGTAATTATC TTA TAAA    CTTT                    
AATTTTATA   TT                 T               ---------T             T   A    AAAC    AACACAATTAAATAACAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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