SE2010971

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6173
  • Medicago truncatula
  • SE2010971
  • Tc1/Mariner
  • St31
  • MtChr8:35344845-35344995
  • TA
  • TACTCCCTCCGGTCACATTTATAAGCAACTTTTGCTTTTGCAGGTTCATTAAATAATTAATGTATCTAAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
         C   CAC                       G         T      TTA         A   ATAA
TACTCCCTC GGT   ATTTATAAGCAACTTTTGCTTTT CAGGTTCAT AAATAA   ATGTATCTA GAT    
||||||||| |||   ||||||||||||||||||||||| ||||||||| ||||||   ||||||||| |||     
ATGAGGGAG CCA   TAAATATTCGTTGAAAATGAAAA GTCTAAGTA TTTATT   TACATAGAT CTG    
         A   ATA                       A         C      CAC         -   ATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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