SE2010974

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6176
  • Medicago truncatula
  • SE2010974
  • Tc1/Mariner
  • St11
  • MtChr7:26001795-26002057
  • TA
  • TACTCCCTCCGTTTCAAAATACATGTCCAA

Secondary structure and sequence

TSD    TIR
5'



3' 
                              TTTT  -  ATGTGCACTATTCACTTGACTTACTTTGACCATACTTTTTAACTAATATATAAATACAAATATTAGCATGTAAGATGTTGTTTGATTTGTCTCG
TACTCCCTCCGTTTCAAAATACATGTCCAA    TG CA                                                                                              
||||||||||||||||||||||||||||||    || ||                                                                                               
ATGAGGGAGGCAAAGTTTTATGTACAGGTT    GT GG                                                                                              
                              --CA  T  TGAAGTGTATACGGTTACGTATTAAAACTGACAATTATAGAAATTAAAAGATTTCATTTTTTAATATTTTTAAATTATAAAACTTTTATAAACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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