SE2020978

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6180
  • Medicago truncatula
  • SE2020978
  • Mutator
  • M72
  • MtChr2:6599012-6599182
  • CATGACTTG
  • TGGAGAATTGCTTTTCTCCTATCTGTTTTTGCTCATTTTTACTGAGAAATACTTGCGTGAGTTAACTCATACAGAG

Secondary structure and sequence

TSD    TIR
5'



3' 
CATGACT     A            C   C               TTA   -A      --CTT                A   A AAT
       TGGAG ATTGCTTTTCTC TAT TGTTTTTGCTCATTT   CTG  GAAATA     GCGTGAGTTAACTCAT CAG G   
       ||||| |||||||||||| ||| |||||||||||||||   |||  ||||||     |||||||||||||||| ||| |    
       ACCTC TGACGAGAAGAG GTA ACAAAAACGAGTAAG   GGC  TTTTAT     CGCACTCAATTGAGTA GTC C   
GTTCAGT     A            A   A               ---   AG      CAACT                C   - ACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3