SE2010989

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6191
  • Medicago truncatula
  • SE2010989
  • Tc1/Mariner
  • St14
  • MtChr3:35338559-35338855
  • TA
  • TACTACCTCCGTCCCTAATTATAAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
                  T    A  CC  CT -   ATAATAATCTGTCCCTTTTTATAAGACCCTTTTGGTATTTCCAAGTACATTAATTATTTTTTTACCAACATACCTTTATTTATTTTGCATTTTTTCTTCAATCAACAATAAATA
TACTACCTCCGTCCCTAA TATA GA  CT  T AAA                                                                                                                  
|||||||||||||||||| |||| ||  ||  | |||                                                                                                                   
ATGATGGAGGCAGGGATT ATAT CT  CG  T AAA                                                                                                                  
                  T    C  --  -- A   CGGTTTTAACGCCTCTAATTCTTTCAACCAACATCATAATTTAAACATATATTGATGATAACAAAAATGTTAAAATAGGAATTCTCTCTCTCAATTAAATATAAAAGTTATATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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