SE2020991

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6193
  • Medicago truncatula
  • SE2020991
  • Mutator
  • M125
  • MtChr6:19918148-19918421
  • ATGTTTTTA
  • GGGTTAAATAAGTAAATAGTCACCCTAAATATATCAACATTTGATTTTAGTTCCCCTAAAATATTCTTGAGGTTTTTGGTCCCTCTAAAATTTTTCATTTAAGAAATTAGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATGTTTTTA                     A  C                          T                                C     TTT        A          CCTAATTTA    AA   TC
         GGGTTAAATAAGTAAATAGTC CC TAAATATATCAACATTTGATTTTAGT CCCCTAAAATATTCTTGAGGTTTTTGGTCCCT TAAAA   TTCATTTA GAAATTAGTC         GTGT  TAC  
         ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||   |||||||| ||||||||||         ||||  |||  A
         CCCAATTTATTCATTTATCAG GG ATTTATATGGTTGTAAACTAAAATCA GGGGATTTTATAAGAACTCTGAAAACCAGGGA ATTTT   AAGTAAAT CTTTAATCAG         TACG  ATG  
ATTTTTGTA                     A  T                          -                                A     TTT        A          --------A    AG   TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3