SE2020994

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6196
  • Medicago truncatula
  • SE2020994
  • Mutator
  • M165
  • MtChr3:510072-510271
  • CATTGAAAC
  • GGAAATACTTGGGTGCCATAGTTTTTTGGTGCCATTGGTGACATAGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
CATTGAAACG   --AA                                   A          TTTTAGATGAAAGAGAATGATTAAAATAAATTATTTAGA
          GGA    TACTTGGGTGCCATAGTTTTTTGGTGCCATTGGTG CATAGGTTCA                                       
          |||    ||||||||||||||||||||||||||||||||||| ||||||||||                                        
          CCT    GTGAACCCACGGTATCAAAAAACCACGGTAACCAC GTATCCATTG                                       
  CAAAGTTA   CATC                                   G          AAACACAGATAGAGAGAGAATTGTTGAGTAAGAGAGAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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