Plant MITE

SE2010999

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_6201
Medicago truncatula
SE2010999
Tc1/Mariner
St4
MtChr4:31470604-31470751
TA
TACTCCCTCCGTTTTAAATATAAGCAAAATTGAATTTTTAGGTTCATTCATTTAATGATATATGTGATTCATAATATGGACCACATACATCAATAAATGAATGAACCTAAAAAGTAAATTTTGCTTATATTTAGAAACGGATAGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

     CC        -                GAA                    A    A      A     A
TACTC  TCCGTTTT AAATATAAGCAAAATT   TTTTTAGGTTCATTCATTTA TGAT TATGTG TTCAT 
|||||  |||||||| ||||||||||||||||   |||||||||||||||||||| |||| |||||| ||||| A
ATGAG  AGGCAAAG TTTATATTCGTTTTAA   AAAAATCCAAGTAAGTAAAT ACTA ATACAC AGGTA 
     AT        A                ATG                    A    C      C     T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2010999

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2010999