SE2021002

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6204
  • Medicago truncatula
  • SE2021002
  • Mutator
  • M2
  • MtChr5:16571919-16572121
  • TAGTAAATT
  • AGTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
         T     ----------A       -   ATATTTGTACAACCATTTCTTAACAACTTTTGTGACAACTTTCTCTTTCATACTCACATTATATTTTTACTTTC
          AGTAA           TTGAGAA ATG                                                                          
          |||||           ||||||| |||                                                                          T
          TCGTT           ATAGTTA ACC                                                                          
TTAAATGATC     ACAATAAACTT       A   AACTGTTGGTGTAACTGTTGGTATAAAAATGTTTCTTTTCATACACAACCGTGTTTTTGGTTTCGTTATCTCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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