SE3550016

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6234
  • Mimulus guttatus
  • SE3550016
  • PIF/harbinger
  • To2
  • scaffold_7:16238254-16238480
  • TAA
  • AGGCCTCGTTTGGTTGGCCAAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 CCA    ------A   -  ATATAATCTAATAAAACGCAATTATATTATTGGACCTTCGATGATCCAATAAAAAACATACCAAGAAGGTAAGATAAA
  AGGCCTCGTTTGGTTGG   AGAT       AGA TT                                                                              
  |||||||||||||||||   ||||       ||| ||                                                                              C
  TCCGGAGCAAACCAATC   TCTA       CTA TT                                                                              
AA                 -CC    ATCATTA   A  GATTTACTAACCTGAAACAAACTATAAACCATAGGGGTTATTGAACAGTCCAGCTGGGCGTTTATAATACAATAGTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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