SE3510022

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6240
  • Mimulus guttatus
  • SE3510022
  • Tc1/Mariner
  • St1
  • scaffold_2:7926817-7927070
  • TA
  • TACTCCCTCCATTCCATTTTAATTGTCTTTTTGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
                                   ---------CTAAAT    CA    AAGAAAGATAATAAATGTGCATGGATTCTAGAAAAATCATAATAAAATGACTAAATAACCACTTTTATTAAA
TACTCCCTCCATTCCATTTTAATTGTCTTTTTGGG               CACA  TATT                                                                        
|||||||||||||||||||||||||||||||||||               ||||  ||||                                                                        T
ATGAGGGAGGTAAGGTAAAATTAACAGAAAGATCT               GTTT  TATT                                                                        
                                   CTTAAAAAAAGTAAA    --    AACAGTGAAATCCTAAGGTTACTTCTTAAATAACACAAAAGAGTTGAAACAGGAATAATGATAATTCTTTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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