SE3520072

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6290
  • Mimulus guttatus
  • SE3520072
  • Mutator
  • M16
  • scaffold_8:3141513-3141716
  • ATATATTAC
  • ATATATTACGATTTGTTCGACCCTACACCCGGTGAAAAACATCGGGTGGGTCTTCTGCTGCCACGTGTCTCTTTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
         TAC A   G                        C                              C      GTATTTTATAA    TT    GCT   AT
   ATATAT   G TTT TTCGACCCTACACCCGGTGAAAAA ATCGGGTGGGTCTTCTGCTGCCACGTGTCT TTTTTT           TAGA  TCCC   AGG  
   ||||||   | ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||           ||||  ||||   |||  T
   TATATA   C AAG AAGCTGGGATGTGGGCCACTTTTT TGGCCCACCTAGAAGACGACGGTGCACAGA AAAAAA           ATTT  GGGG   TCC  
CAT      --C -   G                        A                              A      --------AAG    -T    ATT   AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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