SE3520110

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6328
  • Mimulus guttatus
  • SE3520110
  • Mutator
  • M6
  • scaffold_14:22163318-22163487
  • CTCCCCAAC
  • GGTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
CTCCCCAAC      ATCT          C       GT           AT           ------------   C          AAT
         GGTTTT    ATCCTACACC GGTGAAG  TACACCGGGTA  TTTTTACCGTT            GAT TACACATACC   
         ||||||    |||||||||| |||||||  |||||||||||  |||||||||||            ||| ||||||||||    
         CCGAAA    TAGGATGTGG CCACTTT  ATGTGGCCCAT  AGAAATGGTAA            TTG GTGTGTGTGG   
CAACCCCTC      ACTC          C       --           CT           GTATATGTGTGT   T          GTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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