SE3550142

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6360
  • Mimulus guttatus
  • SE3550142
  • PIF/harbinger
  • To15
  • scaffold_8:9896302-9896429
  • TAA
  • AGGTGGTGTTTGCAAACACTTTTTCAAAATGATTATG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 A          A        AAC      ATGTAAAAAAAAAAACT
  AGGTGGTGTTTGCAAAC CTTTTTCAAA TGATTATG   TTTTTA                 
  ||||||||||||||||| |||||||||| ||||||||   ||||||                 G
  TCCACCACAAACGTTTG GAAAAGGTTT ACTAATAC   CCAAAA                 
AA                 C          C        ---      AAAATAAATAATTTTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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