SE3520202

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6420
  • Mimulus guttatus
  • SE3520202
  • Mutator
  • M10
  • scaffold_11:15920013-15920213
  • ATCATTGGG
  • TCATTGGGGGGGAATACGATGCTACACCCGGTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
A   T   G       A G          C     TTTTC        G    TTTC    C   TGTCTTTTTATTTATTTATTTTATAATTATATTTCAA
 TCA TGG GGGGAAT C ATGCTACACC GGTGA     ACCGGGTA CTCT    TTGA ATG                                     
 ||| ||| ||||||| | |||||||||| |||||     |||||||| ||||    |||| |||                                      
 GGT ACT CCCTTTA G TACGATGTGG CCACT     TGGTCCGT GGGA    ATTA TTC                                     
G   T   A       A A          A     TATAT        -    -TTA    -   TAAGGATGATGCCCAAGTCAATACCGGGTTACCCAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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