SE3520205

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6423
  • Mimulus guttatus
  • SE3520205
  • Mutator
  • M11
  • scaffold_14:16254984-16255170
  • CGTGGATTA
  • GATTAGAGGGAGTTAGATGCTACACCTGGTTATTTACATCGGGTGTATTTGAACCGTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
CGTG    AGA   -                             C     T     AAC     ATTTGATTAAATAACTACCCA  A      ----        TG
    GATT   GGG AGTTAGATGCTACACCTGGTTATTTACAT GGGTG ATTTG   CGTGG                     CT AGCACA    CATACACA  
    ||||   ||| ||||||||||||||||||||||||||||| ||||| |||||   |||||                     || ||||||    ||||||||   
    TTAG   CCT TTAATCTACGATGTGGACCAATAAATGTG TTCAC TAAAT   GCATC                     GA TCGTGT    GTGTGTGT  
 ATA    GTG   A                             A     T     --A     ---------------------  G      ATTA        GG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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