SE3550225

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6443
  • Mimulus guttatus
  • SE3550225
  • PIF/harbinger
  • To2
  • scaffold_5:17539486-17539682
  • TTA
  • AGGCCTCGTTTGGTTGCTAAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                CTA    A     AAATAATCTAATAAAACCCAATTATATTATTGGACCTTCGATGATCCAATAAAAAACATGCCTAGAAG
  AGGCCTCGTTTGGTTG   AGAT AGATT                                                                    
  ||||||||||||||||   |||| |||||                                                                     
  TCCGGAGCAAACCAAC   TCTA ATCAG                                                                    
AT                CCC    -     TACTAATTGATTTATTAACCTGATACAAACTACAAACCATAGGGGTTATTGAACGGTTGAATAGAACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3