SE3520256

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6474
  • Mimulus guttatus
  • SE3520256
  • Mutator
  • M9
  • scaffold_1:3185173-3185483
  • GTTGATATA
  • GTTGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
          ATAT       A    G         C       TAATT      A                 CTC     ACAAAAACACATTTGGTCCCTCATGTTTCAAAAATTCAATATTTTTAGTCATTTCCGTCAATTTTTCGTAAGTATTAATGG
    GTTGAT    GGGAAAA TACA TTTTCGTCC TCAAGTT     TGCATC ATTTCACATTTGGTCCC   TGTTT                                                                                 
    ||||||    ||||||| |||| ||||||||| |||||||     |||||| |||||||||||||||||   |||||                                                                                 A
    TAGCTG    CCTTTTT ATGT AAAAGTAGG AGTTCAG     ACGTGG TAAAGTGTAAACCAGGG   TACAA                                                                                 
TATA      ----       A    A         A       -----      C                 -AA     AGTTATTAAATTGTTAAAACCAGTAAAGGCAGTTAAATGGCGATCAGGCAGTCAATTCCGTCACTACATGTGTGCGAACTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3