SE3510279

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6497
  • Mimulus guttatus
  • SE3510279
  • Tc1/Mariner
  • St3
  • scaffold_12:24171684-24171950
  • TA
  • TACTCCCTCTGTTCCATAATATCTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
               AT    TC    TCTTT  A    TTTTTTTGTTCCATATTATCTGTCACTTTACAATTCCAATGCTGCATTAATTGCTTATTTTTCAATTTTACCCTTATTAACTCTATAGCACTCTT
TACTCCCTCTGTTCC  AATA  TGTC     TG GAAT                                                                                               
|||||||||||||||  ||||  ||||     || ||||                                                                                                
ATGAGGGAGGCAAGG  TTAT  ACAG     AG TGGA                                                                                               
               AT    CC    CAAAA  -    ACCGTGTTTAGAATTCTTAGAGTTATTTATACAGAACTAAAATCCTTTTATCCATAACTATCTGATTTTATGGGAACAAATAATTAATTACGTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3