SE3520282

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6500
  • Mimulus guttatus
  • SE3520282
  • Mutator
  • M1
  • scaffold_6:16265165-16265405
  • AAATAATTT
  • AAATAATTTAGAGTTTATTGCAATTAGTACCCTTGTGTTTTATCGAATTGCTACAAAACTACCCCATGTTATTTTTGTTTGCAAAACCCCATGATTTTAGCAATTAGTCACT

Secondary structure and sequence

TSD    TIR
5'



3' 
     A    A A                           T             CA                TT    TTT      ----   C       ----------     -ATT G  A  GA
 AAAT ATTT G GTTTATTGCAATTAGTACCCTTGTGTT TATCGAATTGCTA  AAACTACCCCATGTTA  TTTG   GCAAAA    CCC ATGATTT          TAGCA    A TC CT  
 |||| |||| | ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||  ||||   ||||||    ||| |||||||          |||||    | || ||  T
 TTTA TAAG C CAAATAACGTTAATCATGGGGACATAA ATAGCTTAATGAT  TTTGATGGGGTACAAT  AAAT   CGTTTT    GGG TACTAAG          ATCGT    T GG GA  
A    A    C -                           T             -A                -C    TAT      TATA   A       TTACAAAAAA     GTGT G  -  AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3