SE3520316

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6534
  • Mimulus guttatus
  • SE3520316
  • Mutator
  • M11
  • scaffold_7:3577658-3577844
  • ATATTTGTA
  • ATATTTGTAGGAAAATTAGATGCTACATCTGGTTATTTACACTGGGTGGATTCGAATTGTAGATCTACACATAATCACACACAC

Secondary structure and sequence

TSD    TIR
5'



3' 
    TT   -A   AAA                        CAC          C       A   ------------    -ACA   T     --    CC
 ATA  TGT  GGA   TTAGATGCTACATCTGGTTATTTA   TGGGTGGATT GAATTGT GAT            CTAC    TAA CACAC  ACAC  
 |||  |||  |||   ||||||||||||||||||||||||   |||||||||| ||||||| |||            ||||    ||| |||||  ||||   
 TGT  ATA  CCT   AATCTACGATGTGGACCAATAAAT   GCCCACCTAA CTTAACA CTA            GATG    ATT GTGTG  TGTG  
A   TT   CC   --C                        ATA          A       C   AACTAATTTATT    GATG   C     TA    TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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