SE3540329

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6547
  • Mimulus guttatus
  • SE3540329
  • CACTA
  • Ca2
  • scaffold_14:19642499-19642755
  • ATT
  • TCACTACAAGAAAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
AT               -     ATTAGCGACACCCTAATTGTGACAAACGCAAAAGTTGTCACTTAATGCACACATTAAGTGACAACATTTTTTTTATTGTCACTAATAACTCTTTTTGTTGTCACTT
  TCACTACAAGAAAAA GTTGC                                                                                                          
  ||||||||||||||| |||||                                                                                                           
  AGTGATGTTTTTTTT AGAAA                                                                                                          
TT               T     ACTCACTGTTGTGGATAAAAAGTTTATCAATCCGTTTTTCACAACAGTGATACGAACAGTGATTGACCCACAGCGATTACGAGATATCACTGTTATTTATTCCTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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