Plant MITE

SE3520363

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_6581
Mimulus guttatus
SE3520363
Mutator
M11
scaffold_7:3577657-3577844
TACAAATAT
GGGGAGTTAGATGCTACACCTGGTTATTTATATCGGGTGGATTTGAATTGTGGATTTG

Secondary structure and sequence

TSD TIR

5'

3'

 TACAAATAT                  C              C                        ATTAAATAACTACC   -   G         ACA
          GGGGAGTTAGATGCTACA CTGGTTATTTATAT GGGTGGATTTGAATTGTGGATTTG              TAC TAA CACACATAC   
          |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||              ||| ||| |||||||||    
          CCTTTTAATCTACGATGT GACCAATAAATGTG CCCACCTAAGCTTAACATCTAGAT              GTG ATT GTGTGTGTG   
GTATAAACAT                  A              A                        --------------   T   A         GGT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

>SE3520363

TACAAATATGGGGAGTTAGATGCTACACCTGGTTATTTATATCGGGTGGATTTGAATTGTGGATTTGATTAAATAACTACCTACTAAGCACACATACACATGGGTGTGTGTGATTATGTGTAGATCTACAATTCGAATCCACCCAGTGTAAATAACCAGATGTAGCATCTAATTTTCCTACAAATATG

Copy Cancel