SE3550373

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6591
  • Mimulus guttatus
  • SE3550373
  • PIF/harbinger
  • To1
  • scaffold_11:17233514-17233639
  • TTA
  • AGGTGGTGTTTGCAAATGCTTTTCCAAAGTGATTATGAGCTTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                       CC                    TTTTG   C    TCAG
  AGGTGGTGTTTGCAAATGCTTTT  AAAGTGATTATGAGCTTTTT     GTT AAAA    
  |||||||||||||||||||||||  ||||||||||||||||||||     ||| ||||     
  TCCACCACAAACGTTTGCGAAAA  TTTTACTAATACTCGAAAAA     CAA TTTT    
AT                       AA                    --TCA   A    CTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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