SE3520374

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6592
  • Mimulus guttatus
  • SE3520374
  • Mutator
  • M11
  • scaffold_8:19234225-19234413
  • GTGAAACTC
  • CTCGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
GTGAAA T    AAATTA        A    A            GG  A    A       AATCTA    -  AT ACACAAACACACGTGTGTAT
      C CGGG      GATGTTAT TCTG TTATTTATACTG  TG ATTT AACCGTA      CGCA TA  C                    
      | ||||      |||||||| |||| ||||||||||||  || |||| |||||||      |||| ||  |                    A
      G GCCC      CTACAATG GGAC AATAAATGTGAC  AC TAAG TTGGCAT      CACT AT  T                    
CTCAAA T    CTCAAA        C    C            AG  C    C       ---CTA    A  -- TATTGATGAGTGATTCGTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3