SE3520375

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6593
  • Mimulus guttatus
  • SE3520375
  • Mutator
  • M14
  • scaffold_8:15652199-15652445
  • ACAAATTCT
  • C

Secondary structure and sequence

TSD    TIR
5'



3' 
    ACAAATT     TTCCAATT     AAACTTGGACTAAAAATTGAAGTGTAAATTACAACCGCCCCCTAAATTAAGGTCTATTTACGAAAAAAACCCTTCACTTTTTCATAATTACATCCACCCCTTGCAATTTGTAAATTTC
           CTTCG        TCCAA                                                                                                                      
           |||||        |||||                                                                                                                      T
           CATTT        AATGT                                                                                                                      
AAGTTAAAACC     --------     TGATGGGGGATCCATTTCACATTAATGTTTTTTTTGGATAAAAAACTTTTTAATGTAGTTTTAGGGACATCAAACATTTATAGAATGTAAGCGAGGGGATGTTTTCCCATAATTACAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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