SE3520400

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6618
  • Mimulus guttatus
  • SE3520400
  • Mutator
  • M11
  • scaffold_7:3577658-3577844
  • TACAAATAT
  • GGGGAGTTAGATGCTACACCTGGTTATTTATATCGGGTGGATTTGAATTGTGGATTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TACAAATAT                  C              C                        ATTAAATAACTACC   -   G         ACA
         GGGGAGTTAGATGCTACA CTGGTTATTTATAT GGGTGGATTTGAATTGTGGATTTG              TAC TAA CACACATAC   
         |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||              ||| ||| |||||||||    
         CCTTTTAATCTACGATGT GACCAATAAATGTG CCCACCTAAGCTTAACATCTAGAT              GTG ATT GTGTGTGTG   
TATAAACAT                  A              A                        --------------   T   A         GGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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